Publications

July 5th, 2007 by emin

Group members are indicated in bold.

Our research is supported by an RO1 grant from NIH/NHGRI, an NSF DMS grant (# 0804597) and a research starter award from the PhRMA Foundation.

Under revision and Tech Reports:

  • P. Kuan, G. Pan, J. A. Thomson, R. Stewart, and S. Keles (2009).  A Statistical Framework for the Analysis of ChIP-Seq Data. Submitted.

2010

  • K. H. Eng*, D. Kvitek*, S. Keles, A. P. Gasch (2010). Transient genotype-environment interactions following environmental shock provide a source of expression variation for essenial genes. Genetics, 184(2):587-93. Highlighted paper. *: Joint first authors.
  • Y. A. Bochkov, K. M. Hanson, S. Keles, R. A. Brockman-Schnedier, N. N. Jarjour,  J. E. Gern (2010). Rhinovirus-induced modulation of gene expression in bronchial epithelial cells from subjects with asthma.  Mucosal Immunology, Jan;3(1):69-80.

2009

  • T. Fujiwara*, H. O’Green*, S. Keles*, K. Blahnik, A. K. Linneman, Y-A. Kang, K. Choi, P. J. Farnham, and E. Bresnick (2009). Discovering hematopoietic mechanisms through genomewide analysis of GATA factor chromatin occupancy. *: Joint first authors. Molecular Cell, 25;36(4):667-81.

2008

2007

2006

2005

  • H. Cinar, S. Keles, and Y. Jin (2005). Expression profiling of GABAergic motor neurons in Caenorhabditis elegans. Current Biology, 15 (4): 340 -346. (Journal website)

2004

2003

2002

  • S. Keles, M.R. Segal (2002). Residual-based tree-structured survival analysis. Statistics in Medicine, 21: 313-326. (Journal website)

Dissertation

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